MOLIERE: Automatic Biomedical Hypothesis Generation


Single- and Multi-level Network Sparsification


Multilevel Support Vector Machines with PETSc


  • Implementation
  • E. Sadrfaridpour, S. Jeereddy, K. Kennedy, A. Luckow, T. Razzaghi, I. Safro "Algebraic multigrid support vector machines", submitted, 2016

Multilevel Support Vector Machines (Matlab)


Musketeer - Network generation tool



Tool for fast response to infection spread and cyber attacks


>Link to download -- will be available soon<


Multiscale solvers for the following problems on (un)weighted graphs:


  • minimum linear arrangement problem - download
  • minimum 2-sum problem
  • minimum bandwidth problem
  • minimum workbound problem
  • minimum k-partitioning problem
  • network compression-friendly reordering
The corresponing paper on the multiscale methods for linear ordering problems can be found here. The algorithms are implemented in C++ using LEDA and Lapack/Lapack++. Please send me an email if you need these implementations.