Justin Sybrandt, Michael Shtutman, Ilya Safro "MOLIERE: Automatic Biomedical Hypothesis Generation System", Proceedings of the 23rd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (oral presentation, in top 8%), pp. 1633-1642, 2017, download
Justin Sybrandt, Angelo Carrabba, Alexander Herzog, Ilya Safro "Are Abstracts Enough for Hypothesis Generation?", IEEE International Conference on Big Data 2018 (BIGDATA), pp. 1504-1513, 2018, preprint at arXiv:1804.05942
Justin Sybrandt, Michael Shtutman, Ilya Safro "Large-Scale Validation of Hypothesis Generation Systems via Candidate Ranking", IEEE International Conference on Big Data 2018 (BIGDATA), pp. 1494-1503, 2018,
preprint at arXiv:1802.03793
Ehsan Sadrfaridpour, Sandeep Jeereddy, Ken Kennedy, Andre Luckow, Talayeh Razzaghi, Ilya Safro "Algebraic multigrid support vector machines", European Symposium on Artificial Neural Networks (ESANN), 2017, (long version arXiv:1611.05487), download,
The corresponing paper on the multiscale methods for linear ordering problems can be found here. The algorithms are implemented in C++ using LEDA and Lapack/Lapack++. Please send me an email if you need these implementations.